STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ29916.1NitT/TauT family transport system substrate-binding protein. (331 aa)    
Predicted Functional Partners:
SEQ62137.1
NitT/TauT family transport system permease protein.
 
 
 0.950
SEQ62103.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.936
SEQ62080.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.926
SER35889.1
Sulfonate transport system permease protein.
 
 
 0.910
SES10914.1
NitT/TauT family transport system permease protein.
 
 
 0.903
SEQ23294.1
NitT/TauT family transport system permease protein.
 
 
 0.881
SEQ89881.1
NitT/TauT family transport system permease protein.
 
 
 0.873
SEQ95918.1
Signal transduction histidine kinase.
    
  0.861
SEQ89806.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.848
SES10931.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.843
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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