STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ31310.1Two component transcriptional regulator, LuxR family. (224 aa)    
Predicted Functional Partners:
SEQ95918.1
Signal transduction histidine kinase.
  
 0.956
SEQ31275.1
Signal transduction histidine kinase.
  0.948
SES32374.1
Signal transduction histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.876
SEQ47874.1
DNA-binding transcriptional regulator, LacI/PurR family.
   
 0.865
SES44613.1
Signal transduction histidine kinase.
  
  0.748
SEQ33977.1
Signal transduction histidine kinase.
 
  0.726
SER32917.1
Signal transduction histidine kinase.
 
  0.723
SEP89346.1
Signal transduction histidine kinase.
 
  0.710
SES19605.1
Signal transduction histidine kinase.
  
  0.704
SER61692.1
Signal transduction histidine kinase.
  
  0.698
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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