STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ18115.1Multiple sugar transport system substrate-binding protein. (447 aa)    
Predicted Functional Partners:
SEQ18217.1
Multiple sugar transport system permease protein.
 
 0.998
SEQ18186.1
Multiple sugar transport system permease protein.
 0.981
SEQ18251.1
Alpha galactosidase A.
 
    0.813
SES27480.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
 0.784
SEQ18145.1
cephalosporin-C deacetylase.
       0.778
SEQ18164.1
alpha-L-fucosidase 2.
       0.775
SER84345.1
Multiple sugar transport system permease protein.
 0.772
SER84321.1
Multiple sugar transport system substrate-binding protein.
  
  
 0.754
SER84371.1
Multiple sugar transport system permease protein.
 
 0.753
SEQ30191.1
Alpha-glucoside transport system permease protein.
  
  0.725
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.