STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ54450.1MoxR-like ATPase. (322 aa)    
Predicted Functional Partners:
SEQ54425.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
  
 0.875
SEQ54395.1
Transglutaminase-like superfamily protein.
 
     0.812
SEQ54476.1
Fibronectin type III domain-containing protein.
     0.791
SER12856.1
Transglutaminase-like enzyme, putative cysteine protease.
 
     0.701
SEQ54561.1
Protein phosphatase.
       0.678
SEQ54507.1
Serine/threonine protein kinase.
       0.674
SEQ54536.1
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr.
       0.674
SER44939.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
  
 0.642
SEQ35408.1
Protein of unknown function DUF58.
  
 0.615
SER27204.1
Arginine/lysine/ornithine decarboxylase.
   
 
 0.555
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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