STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ46766.1Glycosyltransferase involved in cell wall bisynthesis. (661 aa)    
Predicted Functional Partners:
SEQ46794.1
Protein of unknown function.
       0.773
SER97342.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
    
 
 0.685
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.681
SEP83761.1
Trehalose 6-phosphatase.
  
 0.596
SEQ20584.1
Hypothetical protein.
    
   0.592
SES38821.1
Hypothetical protein.
    
   0.592
SES34287.1
Starch phosphorylase.
  
 0.591
SEQ56163.1
Acyltransferase, WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family.
   
 
  0.565
SEQ70229.1
Acyltransferase, WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family.
   
 
  0.565
SER70098.1
Acyltransferase, WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family.
   
 
  0.565
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.