STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ73427.1methylmalonyl-CoA mutase. (586 aa)    
Predicted Functional Partners:
SEQ73395.1
methylmalonyl-CoA mutase.
 
0.999
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
0.999
SER89857.1
methylmalonyl-CoA epimerase.
 
  
 0.988
SEQ73360.1
LAO/AO transport system kinase.
 
  
 0.964
SES41151.1
methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
 
  
 0.931
SEQ82345.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
  
 0.930
SEQ82367.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
  
 0.908
SEQ97759.1
Citrate synthase; Belongs to the citrate synthase family.
     
 0.904
SER90623.1
(2R)-ethylmalonyl-CoA mutase.
 
0.900
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
     
 0.898
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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