STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ76415.1GlcNAc-PI de-N-acetylase. (642 aa)    
Predicted Functional Partners:
SER23583.1
Hypothetical protein.
  
     0.748
SES19521.1
Site-specific DNA recombinase.
  
     0.733
SEP96005.1
Hypothetical protein.
  
     0.718
SER92472.1
CHAT domain-containing protein.
  
     0.706
SES05578.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.706
SEP74452.1
Hypothetical protein.
  
     0.704
SES43912.1
Hypothetical protein.
  
     0.690
SES05596.1
Regulatory protein, luxR family.
  
     0.668
SEQ34861.1
Hypothetical protein.
  
     0.664
SER57856.1
Hypothetical protein.
  
     0.662
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.