STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ81282.1Acyl dehydratase; Belongs to the UPF0336 family. (149 aa)    
Predicted Functional Partners:
SEQ81259.1
Acyl dehydratase.
 
 0.999
SES17419.1
Alcohol dehydrogenase GroES-like domain-containing protein.
  
 0.893
SES41660.1
Acyl transferase domain-containing protein.
  
 0.871
SES41074.1
Amino acid adenylation domain-containing protein.
    
 0.839
SEQ25354.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.830
SES17342.1
Acyl transferase domain-containing protein.
  
 0.804
SES17357.1
Polyketide synthase 12.
  
 0.804
SES41701.1
Polyketide synthase 12.
  
 0.804
SES41714.1
Acyl transferase domain-containing protein.
  
 0.804
SES37308.1
Acyl transferase domain-containing protein.
  
 0.792
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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