STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ83866.1NfeD-like C-terminal, partner-binding. (84 aa)    
Predicted Functional Partners:
SEQ83885.1
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein.
       0.769
SEQ83839.1
Cysteine synthase A.
       0.699
SEQ83919.1
DNA binding domain-containing protein, excisionase family.
       0.636
SEQ83947.1
Hypothetical protein.
  
    0.592
SEQ83669.1
Hypothetical protein.
       0.457
SEQ83698.1
Hypothetical protein.
       0.457
SEQ83726.1
Hypothetical protein.
       0.457
SEQ83752.1
Hypothetical protein.
       0.457
SEQ83777.1
Hypothetical protein.
       0.457
SEQ83806.1
Hypothetical protein.
       0.457
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.