STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ96142.1Unsaturated chondroitin disaccharide hydrolase. (401 aa)    
Predicted Functional Partners:
SER64775.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
   
 0.983
SER62939.1
Endo-1,4-beta-xylanase.
  
 0.948
SER46878.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  0.846
SEQ18164.1
alpha-L-fucosidase 2.
  
 
   0.826
SEQ17743.1
alpha-L-fucosidase 2.
  
 
   0.800
SEQ33855.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
  0.791
SEQ33889.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
  0.791
SEQ99369.1
Protein of unknown function.
   
  0.791
SEQ91684.1
Protein of unknown function.
   
  0.791
SER24640.1
Protein of unknown function.
   
  0.791
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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