STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ98666.1Pyridine nucleotide-disulphide oxidoreductase. (456 aa)    
Predicted Functional Partners:
SER86600.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 0.960
SES20272.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 0.960
SER86469.1
Sarcosine oxidase subunit delta.
  
 0.937
SER09981.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.929
SER86424.1
Sarcosine oxidase subunit gamma.
  
 0.921
SER49769.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
 
 0.890
SES20309.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
 
 0.886
SER86680.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
 
 0.885
SEQ46497.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
 
 0.884
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.859
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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