Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SER12122.1 | SER12149.1 | SAMN04488000_106165 | SAMN04488000_106166 | Hypothetical protein. | Hypothetical protein. | 0.605 |
SER12149.1 | SER12122.1 | SAMN04488000_106166 | SAMN04488000_106165 | Hypothetical protein. | Hypothetical protein. | 0.605 |
SER12149.1 | SER12182.1 | SAMN04488000_106166 | SAMN04488000_106167 | Hypothetical protein. | DivIVA domain-containing protein. | 0.906 |
SER12149.1 | SER12207.1 | SAMN04488000_106166 | SAMN04488000_106168 | Hypothetical protein. | YggT family protein. | 0.560 |
SER12149.1 | SER12265.1 | SAMN04488000_106166 | SAMN04488000_106170 | Hypothetical protein. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.423 |
SER12149.1 | sepF | SAMN04488000_106166 | SAMN04488000_106169 | Hypothetical protein. | Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.526 |
SER12182.1 | SER12149.1 | SAMN04488000_106167 | SAMN04488000_106166 | DivIVA domain-containing protein. | Hypothetical protein. | 0.906 |
SER12182.1 | SER12207.1 | SAMN04488000_106167 | SAMN04488000_106168 | DivIVA domain-containing protein. | YggT family protein. | 0.885 |
SER12182.1 | SER12265.1 | SAMN04488000_106167 | SAMN04488000_106170 | DivIVA domain-containing protein. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.865 |
SER12182.1 | sepF | SAMN04488000_106167 | SAMN04488000_106169 | DivIVA domain-containing protein. | Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.935 |
SER12207.1 | SER12149.1 | SAMN04488000_106168 | SAMN04488000_106166 | YggT family protein. | Hypothetical protein. | 0.560 |
SER12207.1 | SER12182.1 | SAMN04488000_106168 | SAMN04488000_106167 | YggT family protein. | DivIVA domain-containing protein. | 0.885 |
SER12207.1 | SER12265.1 | SAMN04488000_106168 | SAMN04488000_106170 | YggT family protein. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.874 |
SER12207.1 | sepF | SAMN04488000_106168 | SAMN04488000_106169 | YggT family protein. | Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.973 |
SER12265.1 | SER12149.1 | SAMN04488000_106170 | SAMN04488000_106166 | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Hypothetical protein. | 0.423 |
SER12265.1 | SER12182.1 | SAMN04488000_106170 | SAMN04488000_106167 | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | DivIVA domain-containing protein. | 0.865 |
SER12265.1 | SER12207.1 | SAMN04488000_106170 | SAMN04488000_106168 | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | YggT family protein. | 0.874 |
SER12265.1 | sepF | SAMN04488000_106170 | SAMN04488000_106169 | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.975 |
sepF | SER12149.1 | SAMN04488000_106169 | SAMN04488000_106166 | Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | Hypothetical protein. | 0.526 |
sepF | SER12182.1 | SAMN04488000_106169 | SAMN04488000_106167 | Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | DivIVA domain-containing protein. | 0.935 |
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