STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER07915.1GntR family transcriptional regulator. (254 aa)    
Predicted Functional Partners:
SEQ74421.1
GntR family transcriptional regulator.
  
     0.774
SEQ57794.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
   
    0.747
SEQ29982.1
GntR family transcriptional regulator.
  
     0.708
SEQ82345.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.520
SEQ28416.1
Tagatose-6-phosphate ketose/aldose isomerase.
 
  
 0.518
SES12070.1
Transcriptional regulator, AraC family.
   
    0.518
SER35429.1
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.493
SEP85289.1
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.486
SES38509.1
LysR family transcriptional regulator, chromosome initiation inhibitor; Belongs to the LysR transcriptional regulatory family.
   
    0.483
SES20428.1
Transcriptional attenuator, LytR family.
   
    0.479
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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