STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER15221.1Predicted arabinose efflux permease, MFS family. (443 aa)    
Predicted Functional Partners:
SER49169.1
Predicted arabinose efflux permease, MFS family.
  
     0.772
SEP88503.1
Predicted arabinose efflux permease, MFS family.
  
     0.768
SES41102.1
Major Facilitator Superfamily protein.
  
     0.733
SEQ90464.1
MFS transporter, DHA3 family, macrolide efflux protein.
  
     0.730
SEP89656.1
Transmembrane secretion effector.
  
     0.702
SER74029.1
Predicted arabinose efflux permease, MFS family.
  
     0.675
SEP83306.1
Predicted arabinose efflux permease, MFS family.
  
     0.660
SER46744.1
Predicted arabinose efflux permease, MFS family.
  
     0.548
SER56047.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.468
SER15194.1
Superfamily II DNA and RNA helicase.
       0.430
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.