STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER16902.1Spermidine/putrescine transport system substrate-binding protein. (376 aa)    
Predicted Functional Partners:
SER16802.1
Putrescine transport system permease protein.
 
 0.999
SER16823.1
Spermidine/putrescine transport system permease protein.
 
 0.998
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.994
SEQ51888.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.980
SEQ51859.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.963
SEP98766.1
Thiamine transport system ATP-binding protein.
 
 0.958
SES44666.1
Molybdate transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.921
SEQ51918.1
Putative spermidine/putrescine transport system permease protein.
  
  
  0.757
SEQ25354.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
 0.732
SEQ15890.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
    
  0.711
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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