STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER28509.1Beta-glucosidase. (450 aa)    
Predicted Functional Partners:
SER69265.1
Hypothetical protein.
    
 0.822
SER63872.1
Cellulase/cellobiase CelA1; Belongs to the glycosyl hydrolase family 6.
    
  0.796
SER28470.1
Cellobiose ABC transporter membrane protein.
  
  
 0.743
SER28490.1
Cellobiose ABC transporter membrane protein.
       0.735
SER28453.1
Cellobiose-binding protein.
       0.724
SES21028.1
Phage portal protein, HK97 family.
   
   0.673
SEQ37765.1
PTS system, N-acetylglucosamine-specific IIA component.
  
 
 0.650
SEQ15747.1
Carbohydrate binding module (family 35); Belongs to the glycosyl hydrolase 31 family.
  
 0.636
SES07381.1
Ribose 5-phosphate isomerase B.
  
 
 0.633
SER64775.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
    
 0.629
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.