STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER33201.1solute:Na+ symporter, SSS family. (544 aa)    
Predicted Functional Partners:
SER33225.1
Protein of unknown function.
 
     0.952
SEQ47874.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
 
 0.682
SER40613.1
L-proline dehydrogenase.
  
  
 0.590
SES05995.1
L-proline dehydrogenase.
  
  
 0.590
SER33156.1
Septum formation.
       0.572
SER33179.1
Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase).
       0.572
pxpA
UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
    0.571
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.524
SER33251.1
DNA-binding transcriptional regulator, GntR family.
       0.520
SEQ95918.1
Signal transduction histidine kinase.
  
 
 0.519
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.