Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ47874.1 | SEQ59559.1 | SAMN04488000_10373 | SAMN04488000_103467 | DNA-binding transcriptional regulator, LacI/PurR family. | FHA domain-containing protein. | 0.741 |
SEQ47874.1 | SEQ95918.1 | SAMN04488000_10373 | SAMN04488000_105241 | DNA-binding transcriptional regulator, LacI/PurR family. | Signal transduction histidine kinase. | 0.999 |
SEQ47874.1 | SER47825.1 | SAMN04488000_10373 | SAMN04488000_109121 | DNA-binding transcriptional regulator, LacI/PurR family. | Protein kinase domain-containing protein. | 0.766 |
SEQ47874.1 | SES32374.1 | SAMN04488000_10373 | SAMN04488000_12226 | DNA-binding transcriptional regulator, LacI/PurR family. | Signal transduction histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
SEQ47874.1 | SES45459.1 | SAMN04488000_10373 | SAMN04488000_13637 | DNA-binding transcriptional regulator, LacI/PurR family. | FHA domain-containing protein. | 0.741 |
SEQ54561.1 | SEQ59559.1 | SAMN04488000_103307 | SAMN04488000_103467 | Protein phosphatase. | FHA domain-containing protein. | 0.693 |
SEQ54561.1 | SER47825.1 | SAMN04488000_103307 | SAMN04488000_109121 | Protein phosphatase. | Protein kinase domain-containing protein. | 0.857 |
SEQ54561.1 | SES45459.1 | SAMN04488000_103307 | SAMN04488000_13637 | Protein phosphatase. | FHA domain-containing protein. | 0.539 |
SEQ59559.1 | SEQ47874.1 | SAMN04488000_103467 | SAMN04488000_10373 | FHA domain-containing protein. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.741 |
SEQ59559.1 | SEQ54561.1 | SAMN04488000_103467 | SAMN04488000_103307 | FHA domain-containing protein. | Protein phosphatase. | 0.693 |
SEQ59559.1 | SEQ95918.1 | SAMN04488000_103467 | SAMN04488000_105241 | FHA domain-containing protein. | Signal transduction histidine kinase. | 0.804 |
SEQ59559.1 | SER47825.1 | SAMN04488000_103467 | SAMN04488000_109121 | FHA domain-containing protein. | Protein kinase domain-containing protein. | 0.923 |
SEQ59559.1 | SER77227.1 | SAMN04488000_103467 | SAMN04488000_111339 | FHA domain-containing protein. | Serine/threonine protein phosphatase PrpC. | 0.407 |
SEQ59559.1 | SER93695.1 | SAMN04488000_103467 | SAMN04488000_113196 | FHA domain-containing protein. | Protein phosphatase. | 0.720 |
SEQ59559.1 | SES32374.1 | SAMN04488000_103467 | SAMN04488000_12226 | FHA domain-containing protein. | Signal transduction histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.840 |
SEQ59559.1 | SES45452.1 | SAMN04488000_103467 | SAMN04488000_13635 | FHA domain-containing protein. | Protein phosphatase. | 0.757 |
SEQ95918.1 | SEQ47874.1 | SAMN04488000_105241 | SAMN04488000_10373 | Signal transduction histidine kinase. | DNA-binding transcriptional regulator, LacI/PurR family. | 0.999 |
SEQ95918.1 | SEQ59559.1 | SAMN04488000_105241 | SAMN04488000_103467 | Signal transduction histidine kinase. | FHA domain-containing protein. | 0.804 |
SEQ95918.1 | SER47825.1 | SAMN04488000_105241 | SAMN04488000_109121 | Signal transduction histidine kinase. | Protein kinase domain-containing protein. | 0.802 |
SEQ95918.1 | SES32374.1 | SAMN04488000_105241 | SAMN04488000_12226 | Signal transduction histidine kinase. | Signal transduction histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
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