Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP98637.1 | SEQ96142.1 | SAMN04488000_101880 | SAMN04488000_105249 | Glycosyl Hydrolase Family 88. | Unsaturated chondroitin disaccharide hydrolase. | 0.664 |
SEP98637.1 | SER45497.1 | SAMN04488000_101880 | SAMN04488000_10925 | Glycosyl Hydrolase Family 88. | Ricin-type beta-trefoil lectin domain-containing protein. | 0.730 |
SEP98637.1 | SES38704.1 | SAMN04488000_101880 | SAMN04488000_125105 | Glycosyl Hydrolase Family 88. | Hypothetical protein. | 0.616 |
SEP98637.1 | SES44934.1 | SAMN04488000_101880 | SAMN04488000_1352 | Glycosyl Hydrolase Family 88. | Chondroitinase B. | 0.649 |
SEQ02268.1 | SEQ95553.1 | SAMN04488000_101991 | SAMN04488000_105228 | Conserved repeat domain-containing protein. | Alginate lyase. | 0.529 |
SEQ02268.1 | SEQ96142.1 | SAMN04488000_101991 | SAMN04488000_105249 | Conserved repeat domain-containing protein. | Unsaturated chondroitin disaccharide hydrolase. | 0.643 |
SEQ02268.1 | SER35350.1 | SAMN04488000_101991 | SAMN04488000_108154 | Conserved repeat domain-containing protein. | Chitinase; Belongs to the glycosyl hydrolase 18 family. | 0.418 |
SEQ02268.1 | SER45497.1 | SAMN04488000_101991 | SAMN04488000_10925 | Conserved repeat domain-containing protein. | Ricin-type beta-trefoil lectin domain-containing protein. | 0.547 |
SEQ02268.1 | SES38704.1 | SAMN04488000_101991 | SAMN04488000_125105 | Conserved repeat domain-containing protein. | Hypothetical protein. | 0.447 |
SEQ69414.1 | SEQ95553.1 | SAMN04488000_10427 | SAMN04488000_105228 | Hypothetical protein. | Alginate lyase. | 0.476 |
SEQ69414.1 | SER45497.1 | SAMN04488000_10427 | SAMN04488000_10925 | Hypothetical protein. | Ricin-type beta-trefoil lectin domain-containing protein. | 0.582 |
SEQ95553.1 | SEQ02268.1 | SAMN04488000_105228 | SAMN04488000_101991 | Alginate lyase. | Conserved repeat domain-containing protein. | 0.529 |
SEQ95553.1 | SEQ69414.1 | SAMN04488000_105228 | SAMN04488000_10427 | Alginate lyase. | Hypothetical protein. | 0.476 |
SEQ95553.1 | SEQ96142.1 | SAMN04488000_105228 | SAMN04488000_105249 | Alginate lyase. | Unsaturated chondroitin disaccharide hydrolase. | 0.437 |
SEQ95553.1 | SER45497.1 | SAMN04488000_105228 | SAMN04488000_10925 | Alginate lyase. | Ricin-type beta-trefoil lectin domain-containing protein. | 0.763 |
SEQ95553.1 | SES38704.1 | SAMN04488000_105228 | SAMN04488000_125105 | Alginate lyase. | Hypothetical protein. | 0.649 |
SEQ95553.1 | SES44934.1 | SAMN04488000_105228 | SAMN04488000_1352 | Alginate lyase. | Chondroitinase B. | 0.655 |
SEQ96142.1 | SEP98637.1 | SAMN04488000_105249 | SAMN04488000_101880 | Unsaturated chondroitin disaccharide hydrolase. | Glycosyl Hydrolase Family 88. | 0.664 |
SEQ96142.1 | SEQ02268.1 | SAMN04488000_105249 | SAMN04488000_101991 | Unsaturated chondroitin disaccharide hydrolase. | Conserved repeat domain-containing protein. | 0.643 |
SEQ96142.1 | SEQ95553.1 | SAMN04488000_105249 | SAMN04488000_105228 | Unsaturated chondroitin disaccharide hydrolase. | Alginate lyase. | 0.437 |
page 1 of 3