STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER46604.1Multiple sugar transport system substrate-binding protein. (432 aa)    
Predicted Functional Partners:
SER46586.1
Multiple sugar transport system permease protein.
 
  0.996
SER46563.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.972
SER46539.1
Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.882
SER46628.1
DNA-binding transcriptional regulator, LacI/PurR family.
 
     0.839
SES07748.1
Multiple sugar transport system permease protein.
 
 0.835
SER62882.1
Raffinose/stachyose/melibiose transport system permease protein.
 
 0.821
SEQ01314.1
Multiple sugar transport system permease protein.
  
 0.785
SER46517.1
Hypothetical protein.
 
     0.730
SEP83077.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
  
 0.716
SEP85436.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.716
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.