STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER62451.1Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. (674 aa)    
Predicted Functional Partners:
SER62423.1
Rhamnulokinase.
 
 0.993
SER62481.1
L-rhamnose isomerase / sugar isomerase.
 
  
  0.987
SER62514.1
L-rhamnose mutarotase.
 
  
 0.963
SES41074.1
Amino acid adenylation domain-containing protein.
  
 0.921
SER51271.1
Malonyl CoA-acyl carrier protein transacylase.
  
 0.920
SES41080.1
Amino acid adenylation domain-containing protein.
  
 0.917
SER62542.1
Rhamnose transport system substrate-binding protein.
 
     0.910
SEP94881.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.879
araB
L-ribulokinase.
    
 0.811
SES41660.1
Acyl transferase domain-containing protein.
  
 0.792
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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