STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER63132.1Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (327 aa)    
Predicted Functional Partners:
SER63160.1
Simple sugar transport system ATP-binding protein.
  0.989
SER63188.1
Simple sugar transport system substrate-binding protein.
 0.977
SER63105.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.969
SER56837.1
Ribose transport system substrate-binding protein.
 0.956
SES42805.1
Ribose transport system substrate-binding protein.
 0.956
SER56863.1
Ribose transport system ATP-binding protein.
  0.952
SER89659.1
Ribose transport system substrate-binding protein.
 0.945
SES42788.1
Ribose transport system ATP-binding protein.
  0.939
SER64400.1
Putative multiple sugar transport system ATP-binding protein.
  0.937
rbsA
Rhamnose transport system ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.936
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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