STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER64373.1Putative multiple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (404 aa)    
Predicted Functional Partners:
SER64433.1
Putative multiple sugar transport system substrate-binding protein.
 
 0.998
SER64400.1
Putative multiple sugar transport system ATP-binding protein.
 
 0.976
SES02348.1
D-xylose transport system substrate-binding protein.
 
 
 0.948
SES30116.1
Putative multiple sugar transport system substrate-binding protein.
 
 0.944
SES27182.1
D-xylose transport system substrate-binding protein.
 
 0.922
SER64663.1
Cellobiose ABC transporter membrane protein.
     
  0.900
SER56863.1
Ribose transport system ATP-binding protein.
 
 0.849
SER63160.1
Simple sugar transport system ATP-binding protein.
 
 0.835
SER56837.1
Ribose transport system substrate-binding protein.
  
 0.835
SES42788.1
Ribose transport system ATP-binding protein.
 
 0.829
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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