STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER64775.1Aryl-phospho-beta-D-glucosidase BglC, GH1 family. (686 aa)    
Predicted Functional Partners:
SEP97214.1
Hypothetical protein.
   
 0.983
SEQ96142.1
Unsaturated chondroitin disaccharide hydrolase.
   
 0.983
SER64743.1
Fibronectin type III domain-containing protein.
 
 
  0.939
SES12370.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
    
 0.883
SES22156.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
  0.883
SEQ54134.1
Cellulose 1,4-beta-cellobiosidase.
 
 
  0.878
SEQ18164.1
alpha-L-fucosidase 2.
  
 
  0.873
SER63872.1
Cellulase/cellobiase CelA1; Belongs to the glycosyl hydrolase family 6.
 
 
 
0.865
SER38085.1
Chitinase.
    
 0.862
SEQ32158.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
    
0.859
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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