STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER82636.1Acyl-CoA dehydrogenase. (357 aa)    
Predicted Functional Partners:
SER82755.1
Hypothetical protein.
     0.989
SER82608.1
3-oxoacyl-[acyl-carrier protein] reductase.
  0.913
SER82737.1
Hypothetical protein.
 
     0.890
SER82558.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  0.840
SES34686.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 
 0.833
SEQ25354.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 0.832
SER82689.1
enoyl-CoA hydratase.
 
  0.831
SES34673.1
Electron transfer flavoprotein beta subunit.
 
 
 0.831
SER83177.1
Acetyl-CoA acetyltransferase.
 
  0.826
SER82586.1
Transcriptional regulator, TetR family.
 
     0.807
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.