STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES12984.1ATP-binding cassette, subfamily C. (572 aa)    
Predicted Functional Partners:
SES13004.1
ATP-binding cassette, subfamily B.
 
 
0.990
SEQ22448.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
   
  0.930
SEQ31901.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
   
  0.930
SES13056.1
Lanthionine synthetase C-like protein.
 
  
 0.886
SER60177.1
Putative ABC transport system ATP-binding protein.
 
 
0.858
SER90858.1
ABC-type multidrug transport system, ATPase and permease component.
 
  0.851
SER90829.1
ABC-type multidrug transport system, ATPase and permease component.
 
 
 
0.806
SEP94995.1
ATP-binding cassette, subfamily B.
 
 
 
0.801
SEP94963.1
ATP-binding cassette, subfamily B.
 
 
0.790
SER28238.1
ATP-binding cassette, subfamily B.
 
 
 
0.787
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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