STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES10348.1Transglutaminase-like enzyme, putative cysteine protease. (280 aa)    
Predicted Functional Partners:
SES10330.1
Uncharacterized conserved protein, Alpha-E superfamily.
  
 0.994
SES10309.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
 
  
 0.983
SES10365.1
Helix-turn-helix domain-containing protein.
       0.580
SES10292.1
WD domain-containing protein, G-beta repeat-containing protein.
       0.532
SEQ82406.1
Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
   0.481
SER28043.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
   0.481
SER61456.1
Catalase.
   
   0.481
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.