STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES18055.1MFS-type transporter involved in bile tolerance, Atg22 family. (408 aa)    
Predicted Functional Partners:
SES18021.1
Phosphopantetheine attachment site.
 
     0.767
SES18065.1
Amino acid adenylation domain-containing protein.
  
  
 0.738
SES18009.1
MbtH protein.
       0.737
SES18033.1
Surfactin synthase thioesterase subunit.
       0.737
SES18045.1
Cytochrome P450.
       0.737
SES17978.1
Amino acid adenylation domain-containing protein.
 
  
 0.693
SES17997.1
Amino acid adenylation domain-containing protein.
 
  
 0.680
SEQ90464.1
MFS transporter, DHA3 family, macrolide efflux protein.
  
     0.656
SEQ29170.1
Predicted arabinose efflux permease, MFS family.
  
     0.561
SES17967.1
Taurine dioxygenase, alpha-ketoglutarate-dependent.
 
     0.531
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.