STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES17286.1Acyl-CoA dehydrogenase. (381 aa)    
Predicted Functional Partners:
SES34686.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.931
SES34673.1
Electron transfer flavoprotein beta subunit.
 
 0.929
SES17274.1
HAD-superfamily phosphatase, subfamily IIIC/FkbH-like domain-containing protein.
     0.860
SER08820.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.855
SES17318.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.843
SEQ25354.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 0.832
SES17419.1
Alcohol dehydrogenase GroES-like domain-containing protein.
  
 0.813
SES17342.1
Acyl transferase domain-containing protein.
 
 
 0.799
SES22083.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.776
SES17302.1
Acyl carrier protein.
    
  0.775
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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