Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ19491.1 | SES10365.1 | SAMN04488000_102126 | SAMN04488000_1167 | Protein of unknown function. | Helix-turn-helix domain-containing protein. | 0.469 |
SEQ19491.1 | SES20158.1 | SAMN04488000_102126 | SAMN04488000_11861 | Protein of unknown function. | Hypothetical protein. | 0.401 |
SES10365.1 | SEQ19491.1 | SAMN04488000_1167 | SAMN04488000_102126 | Helix-turn-helix domain-containing protein. | Protein of unknown function. | 0.469 |
SES10365.1 | SES20158.1 | SAMN04488000_1167 | SAMN04488000_11861 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.418 |
SES20158.1 | SEQ19491.1 | SAMN04488000_11861 | SAMN04488000_102126 | Hypothetical protein. | Protein of unknown function. | 0.401 |
SES20158.1 | SES10365.1 | SAMN04488000_11861 | SAMN04488000_1167 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.418 |
SES20158.1 | SES20173.1 | SAMN04488000_11861 | SAMN04488000_11862 | Hypothetical protein. | Sporulation-control protein. | 0.593 |
SES20158.1 | SES30199.1 | SAMN04488000_11861 | SAMN04488000_12148 | Hypothetical protein. | Anti-anti-sigma factor. | 0.493 |
SES20158.1 | SES43343.1 | SAMN04488000_11861 | SAMN04488000_13138 | Hypothetical protein. | Anti-anti-sigma factor. | 0.493 |
SES20158.1 | egtD | SAMN04488000_11861 | SAMN04488000_103108 | Hypothetical protein. | L-histidine Nalpha-methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family. | 0.499 |
SES20158.1 | secA-2 | SAMN04488000_11861 | SAMN04488000_11865 | Hypothetical protein. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.455 |
SES20173.1 | SES20158.1 | SAMN04488000_11862 | SAMN04488000_11861 | Sporulation-control protein. | Hypothetical protein. | 0.593 |
SES30199.1 | SES20158.1 | SAMN04488000_12148 | SAMN04488000_11861 | Anti-anti-sigma factor. | Hypothetical protein. | 0.493 |
SES30199.1 | SES43343.1 | SAMN04488000_12148 | SAMN04488000_13138 | Anti-anti-sigma factor. | Anti-anti-sigma factor. | 0.999 |
SES43343.1 | SES20158.1 | SAMN04488000_13138 | SAMN04488000_11861 | Anti-anti-sigma factor. | Hypothetical protein. | 0.493 |
SES43343.1 | SES30199.1 | SAMN04488000_13138 | SAMN04488000_12148 | Anti-anti-sigma factor. | Anti-anti-sigma factor. | 0.999 |
egtD | SES20158.1 | SAMN04488000_103108 | SAMN04488000_11861 | L-histidine Nalpha-methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family. | Hypothetical protein. | 0.499 |
secA-2 | SES20158.1 | SAMN04488000_11865 | SAMN04488000_11861 | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | Hypothetical protein. | 0.455 |