STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES27910.1EcsC protein family protein. (218 aa)    
Predicted Functional Partners:
folD-2
Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.768
SER85472.1
Tfp pilus assembly protein FimV.
  
     0.593
SES23425.1
Hypothetical protein.
  
     0.561
SES27933.1
Pyruvate, water dikinase.
       0.537
SER22785.1
Glycosyltransferase sugar-binding region containing DXD motif-containing protein.
  
     0.507
SES05979.1
Hypothetical protein.
  
     0.489
SER40097.1
Predicted Rossmann fold nucleotide-binding protein.
  
     0.487
SEQ54834.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
  
     0.484
SEQ52385.1
Anti-sigma-K factor rskA.
  
     0.478
SER15927.1
Patatin-like phospholipase.
  
     0.462
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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