STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES30530.1Threonine dehydrogenase. (398 aa)    
Predicted Functional Partners:
SES30518.1
Short-chain dehydrogenase.
  
    0.775
SEQ82345.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.744
SER48781.1
NAD+-dependent secondary alcohol dehydrogenase Adh1.
 
 
0.706
SER07993.1
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID.
  
 
  0.686
SES17419.1
Alcohol dehydrogenase GroES-like domain-containing protein.
  
 
 0.640
SER86448.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 
 0.617
SER59102.1
NADH-quinone oxidoreductase subunit F.
    
 0.611
SER50912.1
HAD-superfamily phosphatase, subfamily IIIC/FkbH-like domain-containing protein.
  
 0.592
SER86600.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 
 0.592
SES20272.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 
 0.592
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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