STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES32399.1Anti-sigma regulatory factor (Ser/Thr protein kinase). (247 aa)    
Predicted Functional Partners:
SES30199.1
Anti-anti-sigma factor.
 
 0.945
SES43343.1
Anti-anti-sigma factor.
 
 0.945
SES32385.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.876
SER25092.1
PAS domain S-box-containing protein.
 
 0.832
SEQ29275.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.826
SER27913.1
Response regulator receiver domain-containing protein.
 
 0.811
SER83992.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.775
SES44629.1
Anti-anti-sigma factor.
  
   0.618
SEQ47874.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
  
 0.614
SES42377.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.614
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.