STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES35695.1Predicted arabinose efflux permease, MFS family. (372 aa)    
Predicted Functional Partners:
SEQ25385.1
Predicted arabinose efflux permease, MFS family.
  
     0.747
SER01105.1
Predicted arabinose efflux permease, MFS family.
  
     0.734
SEQ29170.1
Predicted arabinose efflux permease, MFS family.
  
     0.731
SES33248.1
Transmembrane secretion effector.
  
     0.675
SEP89656.1
Transmembrane secretion effector.
  
     0.653
SES30744.1
Predicted arabinose efflux permease, MFS family.
  
     0.638
SER46744.1
Predicted arabinose efflux permease, MFS family.
  
     0.623
SES41102.1
Major Facilitator Superfamily protein.
  
     0.623
SER74029.1
Predicted arabinose efflux permease, MFS family.
  
     0.588
SES07163.1
Major Facilitator Superfamily protein.
  
     0.565
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.