STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES36995.1PAS domain S-box-containing protein. (468 aa)    
Predicted Functional Partners:
SEQ47874.1
DNA-binding transcriptional regulator, LacI/PurR family.
 
 0.999
SEQ95918.1
Signal transduction histidine kinase.
 
 0.999
SER25092.1
PAS domain S-box-containing protein.
 
 0.999
SER26540.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.999
SES32374.1
Signal transduction histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.999
SEQ47895.1
Response regulator receiver domain-containing protein.
  
 0.998
SER55983.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.998
SES30209.1
GAF domain-containing protein.
  
 0.998
SES30199.1
Anti-anti-sigma factor.
 
 0.996
SES42377.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.996
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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