STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES38765.1Protein of unknown function DUF58. (301 aa)    
Predicted Functional Partners:
SES38792.1
Uncharacterised protein family (UPF0259).
 
     0.894
SES38778.1
Hypothetical protein.
 
  
 0.887
SES38785.1
Protein of unknown function.
 
  
 0.883
SES38771.1
MoxR-like ATPase.
  
 0.852
SES38759.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
  
 0.838
SES38754.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.790
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
      
 0.669
egtD
L-histidine Nalpha-methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
      
 0.664
SEQ69888.1
Hypothetical protein.
   
    0.637
SEQ00967.1
Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
      
 0.587
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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