STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES39909.1AAA-like domain-containing protein. (596 aa)    
Predicted Functional Partners:
SES39916.1
PrgI family protein.
  
 0.996
SEQ01179.1
Concanavalin A-like lectin/glucanases superfamily protein.
 
 
 0.963
SES39922.1
Hypothetical protein.
     
 0.857
SES39938.1
Hypothetical protein.
     
 0.857
SES39930.1
TrbC/VIRB2 family.
     
 0.842
SES39893.1
AAA-like domain-containing protein.
 
  
 0.839
SES39950.1
DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.826
SEQ46214.1
AAA-like domain-containing protein.
 
  
 0.821
SES39811.1
Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains.
  
     0.754
SES39741.1
Pilus assembly protein, ATPase of CpaF family.
 
  
 0.683
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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