STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES40827.1ABC-2 type transport system permease protein. (397 aa)    
Predicted Functional Partners:
SES40833.1
ABC-2 type transport system ATP-binding protein.
 
    0.926
SES40839.1
Right handed beta helix region.
 
    0.921
SES40891.1
2-polyprenyl-6-methoxyphenol hydroxylase.
 
     0.882
SES40854.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
     0.874
SES40897.1
Nitroreductase.
 
    0.850
SES40819.1
ABC-2 type transport system permease protein.
 
    
0.845
SES40925.1
Acyl carrier protein.
 
     0.835
SES40905.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.790
SES40877.1
[acyl-carrier-protein] S-malonyltransferase.
 
     0.755
SER70183.1
ABC-2 type transport system ATP-binding protein.
  
    0.741
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.