STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES41609.1Hypothetical protein. (100 aa)    
Predicted Functional Partners:
SEQ25354.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.816
SES41603.1
Short chain dehydrogenase.
       0.773
SES41587.1
Hypothetical protein.
    
  0.728
SES41595.1
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
    
  0.728
SEQ82345.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.715
SER18200.1
Tartronate-semialdehyde synthase; Belongs to the TPP enzyme family.
  
 
 0.675
SER18243.1
Hydroxypyruvate isomerase.
  
 
 0.659
SER08820.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 
 0.621
SES22083.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.621
SEQ99926.1
3-oxoadipate enol-lactonase.
  
 
 0.610
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.