STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES43764.1Major Facilitator Superfamily protein. (429 aa)    
Predicted Functional Partners:
SEQ15479.1
Predicted arabinose efflux permease, MFS family.
  
     0.774
SER50005.1
Major Facilitator Superfamily protein.
  
     0.772
SES37896.1
Predicted arabinose efflux permease, MFS family.
  
    0.746
SEQ34536.1
Predicted arabinose efflux permease, MFS family.
  
     0.726
SES43751.1
Hypothetical protein.
       0.608
SES43759.1
Hypothetical protein.
       0.608
SEQ05291.1
Predicted arabinose efflux permease, MFS family.
  
    0.602
SER56047.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.468
SES14559.1
Kynurenine formamidase.
   
    0.467
SES43738.1
LuxR family transcriptional regulator, maltose regulon positive regulatory protein.
 
     0.467
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.