STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES44502.1DNA-binding transcriptional regulator, GntR family. (215 aa)    
Predicted Functional Partners:
SES01020.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
  
 0.777
SEQ21835.1
DNA-binding transcriptional regulator, GntR family.
  
     0.775
SEQ60369.1
DNA-binding transcriptional regulator, GntR family.
  
     0.774
SES28653.1
DNA-binding transcriptional regulator, GntR family.
  
     0.774
SEQ29795.1
DNA-binding transcriptional regulator, GntR family.
  
     0.770
SER23342.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.761
SER33251.1
DNA-binding transcriptional regulator, GntR family.
  
     0.753
SEP85260.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
  
 0.748
SEQ15786.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
  
 0.717
SER16236.1
Transcriptional regulator, GntR family.
  
  
 0.711
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.