STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES44780.1Fructoselysine-6-P-deglycase FrlB with duplicated sugar isomerase (SIS) domain. (302 aa)    
Predicted Functional Partners:
SER09981.1
Glutamate synthase (NADPH/NADH) large chain.
   
 0.956
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
 
 0.895
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
   
 0.870
SEQ50749.1
Glutamine synthetase.
 
 
 0.868
SER97234.1
Glutamine synthetase.
  
 
 0.859
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
    
 0.854
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
    
 0.841
SER13033.1
Glutamine synthetase.
  
 
 0.841
SER09949.1
Glutamate synthase (NADPH/NADH) small chain.
    
 0.838
SEQ71147.1
Mannose-6-phosphate isomerase, type 1.
     
 0.836
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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