Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP79395.1 | SEP81092.1 | SAMN04488000_101267 | SAMN04488000_101316 | DNA polymerase-3 subunit beta. | DNA polymerase-3 subunit delta'. | 0.997 |
SEP79395.1 | SER11685.1 | SAMN04488000_101267 | SAMN04488000_106148 | DNA polymerase-3 subunit beta. | DNA polymerase-3 subunit alpha. | 0.990 |
SEP79395.1 | SES04520.1 | SAMN04488000_101267 | SAMN04488000_11517 | DNA polymerase-3 subunit beta. | Exonuclease. | 0.986 |
SEP79395.1 | SES44984.1 | SAMN04488000_101267 | SAMN04488000_13511 | DNA polymerase-3 subunit beta. | DNA polymerase III, delta subunit. | 0.997 |
SEP79395.1 | SES45313.1 | SAMN04488000_101267 | SAMN04488000_1367 | DNA polymerase-3 subunit beta. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.935 |
SEP79395.1 | SES45554.1 | SAMN04488000_101267 | SAMN04488000_1373 | DNA polymerase-3 subunit beta. | DNA polymerase-3 subunit epsilon. | 0.937 |
SEP79395.1 | dnaE2 | SAMN04488000_101267 | SAMN04488000_104278 | DNA polymerase-3 subunit beta. | Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.963 |
SEP79395.1 | dnaX | SAMN04488000_101267 | SAMN04488000_101210 | DNA polymerase-3 subunit beta. | DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.998 |
SEP81092.1 | SEP79395.1 | SAMN04488000_101316 | SAMN04488000_101267 | DNA polymerase-3 subunit delta'. | DNA polymerase-3 subunit beta. | 0.997 |
SEP81092.1 | SER11685.1 | SAMN04488000_101316 | SAMN04488000_106148 | DNA polymerase-3 subunit delta'. | DNA polymerase-3 subunit alpha. | 0.996 |
SEP81092.1 | SES04520.1 | SAMN04488000_101316 | SAMN04488000_11517 | DNA polymerase-3 subunit delta'. | Exonuclease. | 0.889 |
SEP81092.1 | SES44984.1 | SAMN04488000_101316 | SAMN04488000_13511 | DNA polymerase-3 subunit delta'. | DNA polymerase III, delta subunit. | 0.999 |
SEP81092.1 | SES45313.1 | SAMN04488000_101316 | SAMN04488000_1367 | DNA polymerase-3 subunit delta'. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.998 |
SEP81092.1 | SES45330.1 | SAMN04488000_101316 | SAMN04488000_13610 | DNA polymerase-3 subunit delta'. | Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives); Belongs to the UPF0232 family. | 0.520 |
SEP81092.1 | SES45554.1 | SAMN04488000_101316 | SAMN04488000_1373 | DNA polymerase-3 subunit delta'. | DNA polymerase-3 subunit epsilon. | 0.938 |
SEP81092.1 | dnaE2 | SAMN04488000_101316 | SAMN04488000_104278 | DNA polymerase-3 subunit delta'. | Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.989 |
SEP81092.1 | dnaX | SAMN04488000_101316 | SAMN04488000_101210 | DNA polymerase-3 subunit delta'. | DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.998 |
SER11685.1 | SEP79395.1 | SAMN04488000_106148 | SAMN04488000_101267 | DNA polymerase-3 subunit alpha. | DNA polymerase-3 subunit beta. | 0.990 |
SER11685.1 | SEP81092.1 | SAMN04488000_106148 | SAMN04488000_101316 | DNA polymerase-3 subunit alpha. | DNA polymerase-3 subunit delta'. | 0.996 |
SER11685.1 | SES04520.1 | SAMN04488000_106148 | SAMN04488000_11517 | DNA polymerase-3 subunit alpha. | Exonuclease. | 0.986 |
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