STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES45117.1Subtilase family protein; Belongs to the peptidase S8 family. (464 aa)    
Predicted Functional Partners:
SEQ79166.1
Type VII secretion protein EccB.
   
 
 0.839
SEQ79241.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
  
  0.804
SES38112.1
Serine protease.
  
 
 
0.764
SEP90414.1
FtsK/SpoIIIE family protein.
 
 
 0.698
SEP91570.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.651
SEQ79023.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.651
SER51755.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.651
SEQ61679.1
Subtilase family protein; Belongs to the peptidase S8 family.
  
     0.566
SER86326.1
Zn-dependent amino-or carboxypeptidase, M28 family.
  
 0.512
SEQ02268.1
Conserved repeat domain-containing protein.
    
  0.464
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.