STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES45859.1Probable phosphoglycerate mutase. (195 aa)    
Predicted Functional Partners:
SES01178.1
Phosphoserine phosphatase.
    
 0.701
SEP96703.1
Cystathionine beta-synthase.
   
  0.661
SER79997.1
Pyruvate, orthophosphate dikinase.
   
 0.588
SEQ55293.1
Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.539
SER80053.1
Transcriptional regulator, TetR family.
  
     0.516
SER80025.1
Hypothetical protein.
 
     0.509
SER91573.1
Homoserine dehydrogenase.
    
  0.491
SES45858.1
Hypothetical protein.
       0.483
cobQ
Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
  
  
 0.463
SER76113.1
FBP C-terminal treble-clef zinc-finger.
  
     0.434
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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