STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARN79803.1Tautomerase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)    
Predicted Functional Partners:
ARN79802.1
Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
     
 0.792
ARN82234.1
Nucleotide pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.588
ARN82846.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.518
ARN81668.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.494
ARN79804.1
Methane monooxygenase/ammonia monooxygenase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.476
ARN79805.1
Methane monooxygenase/ammonia monooxygenase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.476
ARN79806.1
Methane monooxygenase/ammonia monooxygenase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.470
B1812_11945
MFS transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
ARN82843.1
Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.428
ARN79801.1
RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.410
Your Current Organism:
Methylocystis bryophila
NCBI taxonomy Id: 655015
Other names: DSM 21852, M. bryophila, Methylocystis bryophila Belova et al. 2013, Methylocystis sp. H2s, Methylocystis sp. S284, VKM B-2545, strain H2s
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