STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARN81048.1Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NifD/NifK/NifE/NifN family. (556 aa)    
Predicted Functional Partners:
ARN81047.1
Nitrogenase iron-molybdenum cofactor biosynthesis protein NifN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.979
ARN81043.1
Ferredoxin III, nif-specific; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.970
ARN81046.1
Nitrogen fixation protein NifX; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.962
ARN81045.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.955
ARN81051.1
Nitrogenase iron protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.943
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.919
nifH-2
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.919
ARN83490.1
Nitrogenase cofactor biosynthesis protein NifB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.917
ARN80796.1
Nitrogenase cofactor biosynthesis protein NifB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.915
ARN81030.1
Nitrogenase cofactor biosynthesis protein NifB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.901
Your Current Organism:
Methylocystis bryophila
NCBI taxonomy Id: 655015
Other names: DSM 21852, M. bryophila, Methylocystis bryophila Belova et al. 2013, Methylocystis sp. H2s, Methylocystis sp. S284, VKM B-2545, strain H2s
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