Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEZ79958.1 | EEZ80517.1 | Sup05_0221 | Sup05_0052 | DNA polymerase III, delta prime subunit. | DNA polymerase III, delta subunit. | 0.999 |
EEZ79958.1 | EEZ80658.1 | Sup05_0221 | Sup05_0514 | DNA polymerase III, delta prime subunit. | DNA polymerase III, alpha subunit. | 0.999 |
EEZ79958.1 | dnaX | Sup05_0221 | Sup05_0921 | DNA polymerase III, delta prime subunit. | DNA polymerase III, gamma/tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.999 |
EEZ79958.1 | rnt | Sup05_0221 | Sup05_1027 | DNA polymerase III, delta prime subunit. | DNA polymerase III, epsilon subunit; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis. | 0.707 |
EEZ80162.1 | EEZ80266.1 | Sup05_0385 | Sup05_0338 | Hypothetical protein. | Recombinational DNA repair protein, RecF pathway; Involved in DNA repair and RecF pathway recombination. | 0.593 |
EEZ80162.1 | EEZ80517.1 | Sup05_0385 | Sup05_0052 | Hypothetical protein. | DNA polymerase III, delta subunit. | 0.733 |
EEZ80162.1 | EEZ80708.1 | Sup05_0385 | Sup05_0618 | Hypothetical protein. | Hypothetical protein. | 0.587 |
EEZ80266.1 | EEZ80162.1 | Sup05_0338 | Sup05_0385 | Recombinational DNA repair protein, RecF pathway; Involved in DNA repair and RecF pathway recombination. | Hypothetical protein. | 0.593 |
EEZ80266.1 | EEZ80517.1 | Sup05_0338 | Sup05_0052 | Recombinational DNA repair protein, RecF pathway; Involved in DNA repair and RecF pathway recombination. | DNA polymerase III, delta subunit. | 0.715 |
EEZ80266.1 | EEZ80708.1 | Sup05_0338 | Sup05_0618 | Recombinational DNA repair protein, RecF pathway; Involved in DNA repair and RecF pathway recombination. | Hypothetical protein. | 0.693 |
EEZ80266.1 | dnaX | Sup05_0338 | Sup05_0921 | Recombinational DNA repair protein, RecF pathway; Involved in DNA repair and RecF pathway recombination. | DNA polymerase III, gamma/tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.459 |
EEZ80516.1 | EEZ80517.1 | Sup05_0051 | Sup05_0052 | Hypothetical protein. | DNA polymerase III, delta subunit. | 0.813 |
EEZ80516.1 | proA | Sup05_0051 | Sup05_0053 | Hypothetical protein. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.800 |
EEZ80516.1 | tyrS | Sup05_0051 | Sup05_0054 | Hypothetical protein. | Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily. | 0.769 |
EEZ80517.1 | EEZ79958.1 | Sup05_0052 | Sup05_0221 | DNA polymerase III, delta subunit. | DNA polymerase III, delta prime subunit. | 0.999 |
EEZ80517.1 | EEZ80162.1 | Sup05_0052 | Sup05_0385 | DNA polymerase III, delta subunit. | Hypothetical protein. | 0.733 |
EEZ80517.1 | EEZ80266.1 | Sup05_0052 | Sup05_0338 | DNA polymerase III, delta subunit. | Recombinational DNA repair protein, RecF pathway; Involved in DNA repair and RecF pathway recombination. | 0.715 |
EEZ80517.1 | EEZ80516.1 | Sup05_0052 | Sup05_0051 | DNA polymerase III, delta subunit. | Hypothetical protein. | 0.813 |
EEZ80517.1 | EEZ80658.1 | Sup05_0052 | Sup05_0514 | DNA polymerase III, delta subunit. | DNA polymerase III, alpha subunit. | 0.999 |
EEZ80517.1 | EEZ80708.1 | Sup05_0052 | Sup05_0618 | DNA polymerase III, delta subunit. | Hypothetical protein. | 0.755 |
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