STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ80572.1Periplasmic or secreted lipoprotein. (245 aa)    
Predicted Functional Partners:
EEZ80573.1
Hypothetical protein; Belongs to the UPF0102 family.
       0.800
EEZ80167.1
NAD-dependent aldehyde dehydrogenase.
   
 
  0.693
rsmI
Methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.621
EEZ80575.1
Ferredoxin.
       0.571
EEZ80124.1
Hypothetical protein.
  
    0.563
EEZ80708.1
Hypothetical protein.
  
     0.486
EEZ79828.1
Hypothetical protein; Belongs to the BI1 family.
  
     0.409
EEZ80266.1
Recombinational DNA repair protein, RecF pathway; Involved in DNA repair and RecF pathway recombination.
  
     0.407
Your Current Organism:
uncultured SUP05 cluster
NCBI taxonomy Id: 655186
Other names: u. SUP05 cluster bacterium, uncultured SUP05 cluster bacterium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.