Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEZ80804.1Type II secretory component PulF. (412 aa)    
Predicted Functional Partners:
EEZ80805.1
Type II secretory ATPase PilB.
 
 
 0.998
EEZ80806.1
Type II secretory component HofQ; Belongs to the bacterial secretin family.
 
 
 
 0.949
EEZ80366.1
Type II secretory prepilin signal peptidase PulO.
 
  
 0.933
EEZ80365.1
Tfp pilus assembly protein PilT.
 
  
 0.829
EEZ80364.1
Tfp pilus assembly protein PilT.
 
  
 0.819
EEZ80657.1
Hydrolase,metallo-beta-lactamase superfamily.
   
  
 0.735
EEZ80455.1
Single-stranded DNA-binding protein.
  
    0.527
EEZ80456.1
Hypothetical protein.
  
    0.466
Your Current Organism:
uncultured SUP05 cluster
NCBI taxonomy Id: 655186
Other names: u. SUP05 cluster bacterium, uncultured SUP05 cluster bacterium
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